AI Drug Discovery Scientist.
Albuquerque.
$136,000
median salary, 14% below the national average
$103,000 to $172,000. Last updated April 2026.
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Data points to own the conversation.
A AI Drug Discovery Scientist in Albuquerque earns a median of $136,000 in 2026. That is 14% below the national average. The range runs from $103,000 to $172,000, and where you land depends on your experience, your skills, and how well you negotiate. Compensation reflects the combination of computational biology expertise and ML engineering skills.
Salary range
Where do you fall?
Salary by experience
The gap between entry and lead level is typically $123,000. Where you land depends on years of experience and what you bring to the table.
Entry (0-2 yrs)
$88,000
to $109,000
Mid (3-5 yrs)
$116,000
to $143,000
Senior (6-9 yrs)
$150,000
to $177,000
Lead (10+ yrs)
$170,000
to $211,000
Salary trend
+8% YoYTotal compensation
Base salary is not the full picture. Equity, bonus, and signing can add $56,000 to the total package.
Base
$136,000
Equity
$34,000
Bonus
$14,000
Signing
$8,000
Estimated total: $192,000
How Albuquerque compares
Albuquerque, NM
$136,000
Cost of living: 12% below average
National Average
$158,000
Albuquerque is $22,000 below
AI Drug Discovery Scientist salary by city
Salary by role in Albuquerque
What you should know
Here is what the AI Drug Discovery Scientist market actually looks like in Albuquerque. Albuquerque's economy is driven by Sandia and Los Alamos National Laboratories, Kirtland Air Force Base, and a growing film production industry. The city offers affordable living and a strong pipeline of research and engineering jobs tied to national defense and energy programs. Compensation reflects the combination of computational biology expertise and ML engineering skills. Scientists who can apply deep learning to molecular design, protein structure prediction, and ADMET modeling command premiums. Publication record in both ML and drug discovery venues adds significant value. Pharma industry experience amplifies salary above pure tech roles.
Postdoc scientists start at $110,000 to $130,000. Mid-level scientists with deployed drug discovery models reach $148,000 to $175,000. Senior scientists leading AI drug discovery programs earn $185,000 to $230,000. Directors of computational drug discovery at pharma companies can reach $260,000 to $340,000 in total compensation. In Albuquerque, your dollars stretch further. Cost of living runs 12% below the national average, which means even a median salary buys a stronger lifestyle.
Base salary is not the full picture. Equity at biotech AI startups can be substantial, adding $30,000 to $100,000 in annual value. Pharma companies offer bonuses of 15% to 25% tied to pipeline milestones. Some organizations provide milestone bonuses when AI-discovered compounds advance through clinical trials. Benefits typically include generous research budgets. And on the tax side: new Mexico's top income tax rate is 5.9%. Albuquerque has no city income tax. The moderate state rate and affordable housing create reasonable net compensation. When someone quotes you $136,000, ask what the total package looks like. The gap between base and total comp is where real money hides.
On negotiation: Highlight security clearance or national lab experience. Sandia and Los Alamos pay nationally competitive salaries with excellent federal benefits packages. The range for AI Drug Discovery Scientists in Albuquerque runs from $103,000 to $172,000. That is not a narrow window. Where you land inside it depends almost entirely on whether you negotiate and how well you prepare.
Sources: SEC filings, H-1B LCA (DOL), BLS OES, 50+ job posting platforms. COL: BEA Regional Price Parities (2025). Data verified by Justin Bartak, Founder & Chief AI Officer. Last verified April 8, 2026. Full methodology
Considering a related role?
- A AI Quality Assurance Engineer in Albuquerque earns $135,000 (1% less)
- The highest-paying role in Albuquerque is Distinguished Engineer at $287,000
Common questions.
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