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  1. Home/
  2. Salaries/
  3. AI Protein Structure Specialist/
  4. St. Louis
Salaries

AI Protein Structure Specialist.

St. Louis.

$206,000

median salary, 6% below the national average

$161,000 to $268,000. Last updated August 2026.

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Get the job.

Data points to own the conversation.

St. Louis is 10% cheaper than the national average. For AI Protein Structure Specialists, that shakes out to a median of $206,000, with the full range spanning $161,000 to $268,000. Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. Know the range before you walk in. These figures are Orbyt estimates, computed rather than measured, and must not be cited as Bureau of Labor Statistics figures; the published BLS wage for the occupation this role maps to is shown separately on this page.

Salary range.

25th Percentile

$161,000

per year

Median

$206,000

per year

75th Percentile

$268,000

per year

Where do you fall?

$161,000$268,000

Orbyt estimate for AI Protein Structure Specialist in St. Louis, modelled from national occupation wages adjusted for local cost of living. The published government benchmark for this occupation is below.

Government benchmark for this occupation

The US Bureau of Labor Statistics reports a median annual wage of $79,550 for Biochemists and Biophysicists (SOC 19-1021) in the St. Louis, MO-IL metropolitan area, based on 210 employed workers (May 2025 release).

10th percentile

$64,710

25th percentile

$75,700

Median

$79,550

75th percentile

$100,300

90th percentile

$132,410

Workers surveyed

210

Why this differs from the estimate above. The Orbyt estimate of $206,000 is 159% higher than this published figure. That is usually not an error in either number: BLS reports by occupation code, and Biochemists and Biophysicists covers a different population than the AI Protein Structure Specialist title as it is typically advertised. Both are shown, unreconciled, so you can judge which one describes the job you mean.

BLS publishes wages by occupation code, not by job title, so this figure covers every role mapped to Biochemists and Biophysicists (SOC 19-1021) rather than AI Protein Structure Specialist specifically. The St. Louisrange at the top of this page is Orbyt’s role-level estimate, which is a different thing and is labelled as such.

View the BLS source for SOC 19-1021

Salary by experience.

The gap between entry and lead level is typically $185,000. Where you land depends on years of experience and what you bring to the table.

Entry (0-2 yrs)

$134,000

to $165,000

Mid (3-5 yrs)

$175,000

to $216,000

Senior (6-9 yrs)

$227,000

to $268,000

Lead (10+ yrs)

$258,000

to $319,000

Total compensation.

Base salary is not the full picture. Equity, bonus, and signing can add $95,000 to the total package.

Base

$206,000

Equity

$58,000

Bonus

$25,000

Signing

$12,000

Estimated total: $301,000

How St. Louis compares.

St. Louis, MO

$206,000

Cost of living: 10% below average

National Average

$220,000

St. Louis is $14,000 below

AI Protein Structure Specialist salary by city.

AI Protein Structure Specialist salary comparison across 10 cities
CityMedianRangeCOLAdjusted
San Francisco, CA$306,000$239,000 to $398,0001.35x$227,000
San Jose, CA$298,000$233,000 to $387,0001.38x$216,000
Honolulu, HI$295,000$230,000 to $383,0001.30x$227,000
New York, NY$279,000$218,000 to $362,0001.28x$218,000
Boston, MA$271,000$212,000 to $352,0001.22x$222,000
Seattle, WA$265,000$207,000 to $344,0001.24x$214,000
Washington DC, DC$264,000$206,000 to $343,0001.25x$211,000
Los Angeles, CA$262,000$205,000 to $341,0001.18x$222,000
San Diego, CA$252,000$197,000 to $328,0001.17x$215,000
St. Louis, MO$206,000$161,000 to $268,0000.90x$229,000

See all 81 cities for AI Protein Structure Specialist →

Salary by role in St. Louis.

Salary comparison by role in St. Louis
RoleMedianRange
CTO$278,000$217,000 to $362,000
General Counsel$255,000$198,000 to $331,000
CEO$255,000$185,000 to $352,000
AI Protein Structure Specialist$206,000$161,000 to $268,000
CTO, AI Startup$203,000$159,000 to $265,000
Drug Discovery AI Researcher$201,000$157,000 to $262,000
AI Trading Strategist$199,000$155,000 to $258,000
AI Risk Analytics Engineer$199,000$156,000 to $260,000

What you should know.

Here is what the AI Protein Structure Specialist market actually looks like in St. Louis. St. Louis offers one of the most affordable major metro areas in the country, with a strong base in healthcare, financial services, and manufacturing. The region's anchor employers include Boeing, Centene, and Washington University's medical campus. A growing biotech and plant sciences corridor centered on the Cortex Innovation District is attracting new investment and talent. Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. AI Protein Structure Specialists with experience across the full ML lifecycle, from research prototyping to production serving, earn more than those focused on a single phase. Domain expertise in high-stakes verticals like healthcare, finance, or autonomous systems adds measurable premiums.

Entry-level AI Protein Structure Specialists start near $172,000. Mid-career professionals with three to five years of experience reach $220,000 to $286,000. Senior-level roles command $282,000 to $341,000. Management transitions to director-level positions offer $363,000 and above. In St. Louis, cost of living sits near the national average, so the numbers you see are roughly what you keep.

Base salary is not the full picture. Equity at top-tier companies adds 30% to 60% above base salary. Annual bonuses of 15% to 25% are standard. Signing bonuses of $25,000 to $75,000 are common when changing roles. Refresher equity grants vest annually. Relocation packages and executive benefits like financial planning are typical. And on the tax side: missouri's top income tax rate is about 4.8%, and St. Louis City adds a 1% earnings tax. The low base cost of living means your after tax salary still stretches further than in most metros. When someone quotes you $206,000, ask what the total package looks like. The gap between base and total comp is where real money hides.

On negotiation: Emphasize your willingness to work in person at Cortex or the BJC campus. St. Louis employers offer higher packages for candidates who commit to the local innovation hubs. The range for AI Protein Structure Specialists in St. Louis runs from $161,000 to $268,000. That is not a narrow window. Where you land inside it depends almost entirely on whether you negotiate and how well you prepare.

Sources: BLS OES, H-1B LCA (DOL). COL: BEA Regional Price Parities (2025). Data verified by Justin Bartak, Founder & Chief AI Officer. Last verified July 1, 2026. Full methodology

Interactive

Is your offer competitive?

Enter your AI Protein Structure Specialist offer to see where you stand in St. Louis.

$

25th

$161,000

Median

$206,000

75th

$268,000

Considering a related role?

  • A CTO, AI Startup in St. Louis earns $203,000 (1% less)
  • The highest-paying role in St. Louis is CTO at $278,000
  • See all ai engineering roles tracked in Orbyt Intelligence

Common questions.

Production deployment experience, published research or open source contributions, and expertise with the latest model architectures command the highest premiums. Proficiency in Python, PyTorch, and cloud ML platforms is baseline. Experience with LLM fine-tuning, RLHF, and inference optimization is increasingly differentiated.

AI labs and foundation model companies pay 20% to 40% more than enterprises. Well-funded AI startups offer competitive base salaries with significant equity upside. Large tech companies provide the most stable total compensation packages with strong equity vesting schedules.

Ask about equity structure, vesting schedule, annual bonus targets, 401(k) match, health insurance premiums, PTO policy, and remote flexibility. Equity at top-tier companies adds 30% to 60% above base salary. In St. Louis's market, these extras can add $51,500 or more on top of the base salary.

Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. AI Protein Structure Specialists with experience across the full ML lifecycle, from research prototyping to production serving, earn more than those focused on a single phase. Domain expertise in high-stakes verticals like healthcare, finance, or autonomous systems adds measurable premiums. In St. Louis, these factors can push compensation from the 25th percentile of $161,000 to the 75th percentile of $268,000 or beyond.

St. Louis offers one of the most affordable major metro areas in the country, with a strong base in healthcare, financial services, and manufacturing. For AI Protein Structure Specialists specifically, the median salary of $206,000 reflects that demand.

Remote work has compressed geographic salary premiums for AI Protein Structure Specialists. Some St. Louis employers offer location adjusted pay, while others maintain local rates to attract in office talent. In St. Louis's moderate cost market, remote and local salaries are converging. The $161,000 to $268,000 range reflects both arrangements.

St. Louis offers one of the most affordable major metro areas in the country, with a strong base in healthcare, financial services, and manufacturing. For AI Protein Structure Specialists specifically, model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers, which signals sustained demand. The current compensation range of $161,000 to $268,000 reflects a market that is competing for talent.

AI Protein Structure Specialist salary in other cities.

Fargo$194,000
Houston$216,000
Hartford$242,000
Honolulu$295,000
Indianapolis$198,000
Jackson$179,000

Other salaries in St. Louis.

AI Engineer$124,000
AI Product Manager$156,000
AI Research Scientist$123,000
AI Safety Engineer$122,000

Related salary pages

Jump to nearby roles and cities most relevant to AI Protein Structure Specialists in St. Louis.

  • AI EngineerSt. Louis, MO$124,000
  • AI Product ManagerSt. Louis, MO$156,000
  • AI Protein Structure SpecialistFargo, ND$194,000
  • AI Protein Structure SpecialistHouston, TX$216,000
  • AI EngineerFargo, ND$111,000
  • AI Product ManagerHouston, TX$168,000
  • AI Protein Structure SpecialistHartford, CT$242,000
  • AI Research ScientistSt. Louis, MO$123,000

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"AI Protein Structure Specialist Salary in St. Louis, MO." Orbyt Salary Explorer, August 2026. https://www.orbytjobs.ai/salaries/ai-protein-structure-specialist/st-louis

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